scholarlycomms Archives - Digital Science https://www.digital-science.com/tags/scholarlycomms/ Advancing the Research Ecosystem Tue, 04 Jul 2023 16:13:36 +0000 en-US hourly 1 https://wordpress.org/?v=6.7.2 Inside Story: How a postgrad plagiarised at least 60 papers in huge publishing scam https://www.digital-science.com/blog/2022/09/inside-story-how-a-postgrad-plagiarised-at-least-60-papers/ Thu, 01 Sep 2022 17:45:24 +0000 https://www.digital-science.com/?p=58958 Investigating a plagiarism "rabbit hole" has paid off for Ripeta CEO Leslie McIntosh.

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To fall down a rabbit hole, in today’s usage, implies that while done voluntarily, the consequences are nightmarish, with all sorts of hazards and unintended consequences. While this differs to the original meaning from Lewis Carroll’s Alice’s Adventures in Wonderland, as this New Yorker article spells out, there are corollaries that have only been discovered in today’s online-dependent world.

So, when Ripeta co-founder and CEO Leslie McIntosh described the start of her investigation of suspicious publication activity in March 2022 as being “interested in going down this rabbit hole”, she knew that while it would satisfy her curiosity as someone who had built a company on the basis of trying to improve science, it could also lead to some painful realisations as to how research and publications can go awry.

Back Story

The rabbit hole first appeared – as they so often do – in the shape of a tweet where an author had bemoaned the fact that a journal was ignoring the entreaties to act on a paper that had evidently plagiarised their own work. Over a year later, nothing had been done and so the author had taken to social media to air their concerns. After looking into the alleged plagiarism, Dr McIntosh found that the author in question – Mohammed Sabah Uddin – had published well over 100 papers while at Southeast University in Bangladesh before moving on more recently to Hong Kong University. Dr McIntosh’s suspicions were further raised by an acknowledgement in the suspect article from ‘Pharmakon Neuroscience’, which could not be verified in the GRID database maintained by parent company Digital Science

After completing a series of integrity checks using Ripeta’s technology, including cross-referencing co-authors and funding agencies, Dr McIntosh found a number of other similar acknowledgments of Pharmakon by using the Dimensions database, which contains full text searching suitable to support this type of forensic work.

Dr McIntosh explains: “The work my colleagues and I carry out is a way of protecting the academic record, and in so doing supports the increasing number of institutions, publishers, funders, and researchers who place research integrity at the heart of their approach to research.”

“As part of Ripeta’s work providing tools to highlight potential challenges to research and publication integrity principles, we will build a case study so key stakeholders can learn from this example. The work has also fed into Ripeta’s development of new solutions for research integrity.”

Analyses revealed other anomalies in Uddin’s publication record, such as:

  • A large number of articles published (130+) in a short time (from 2016-2021; source: Dimensions)
  • A high number of citations to those papers (2,000+)
  • A high number of verified reviews on Publons (300+).

Further details on Uddin’s publication record can be seen in the Appendix below.

These and other ‘trust markers’ led Dr McIntosh to consult Digital Science colleague Simon Linacre, who in addition to having 20 years’ experience in academic publishing, is also a Trustee of COPE with expertise in deceptive publishing practices. Confirming the findings of the investigation, it was time to approach the author himself.

“The work my colleagues and I carry out is a way of protecting the academic record, and in so doing supports the increasing number of institutions, publishers, funders, and researchers who place research integrity at the heart of their approach to research.”

Dr Leslie McIntosh, Founder and CEO, Ripeta

No Reply

In May 2022, Linacre used several verified email addresses to contact Uddin with a number of questions about the high volume of his articles and their similarities to other papers. Uddin was contacted three times to no avail, which is common when dealing with suspicious actors in the publishing environment. It was then decided to contact his current employer, which not only sparked an immediate response from HKU but also from Uddin himself, all on the same day. Apologising for not replying because earlier emails had gone into his email junk folder, scant details were supplied to the initial queries that had been raised. Further queries were sent to Uddin, this time copying in HKU, before the university announced a formal investigation.

The university acted quickly. After little more than a month following its investigation, HKU found evidence of improprieties on behalf of Uddin. It said he had admitted to copying 60 published papers out of a total of 180 published in the last few years – industrial-scale plagiarism made possible by using paraphrasing software to escape detection by anti-plagiarism tools. At this stage, it is still unclear how the other papers were written and published so quickly and which exact papers he authored legitimately. Overall, 90% of all articles published by Uddin are indexed in PubMed across more than 100 different journals and 10 different publishers. 

Soon after concerns were raised with HKU, Uddin’s publication history in his ORCiD profile significantly changed from populated to empty. All citations and references were deleted. In late June, HKU signalled their investigations had concluded. HKU informed Digital Science Uddin would withdraw from his PhD program at the university, effective on 1st August.

Speaking on behalf of HKU, Professor Danny Chan, Director (Education and Development of Research Integrity) said: “Upholding research integrity has always been, and will continue to be, our top priority. Any breach of trust is not only detrimental to our career, but also to the funders and the academic world. We strive to ensure our students and colleagues are putting this commitment in daily practice.“ 

Looking Ahead

Since the story was published in Retraction Watch on 25 August, a number of enquiries have been made about other aspects of the case. Who was the author in question? Why did they plagiarise so many articles? Could more have been done to identify what was going on earlier?

As Dr McIntosh commented on the Retraction Watch article when someone asked about Uddin’s acceptance into a PhD program at HKU: “This means the university must have access to both a database with all the publications and a means to disambiguate the author’s name. If anything, it shows the cracks in our current ecosystem and that HKU is willing to improve.”

To ponder too much on the motivations of an individual author can risk overlooking the systemic issues in play that can drive researchers into going to extreme lengths to develop a stacked CV. The proverbial ‘publish or perish’ culture still persists in many research environments, and it is unlikely Uddin is the first to use new tools such as paraphrasing software to pad out their publishing record. The good news is that in addition to Ripeta’s existing solutions, it is developing new tools and integrations that have been aided by the Uddin investigation which should help institutions and publishers head off such problems in the future. The bad news is, however, that as part of the investigations into Uddin, they necessitated several other ‘rabbit holes’ in the shape of co-authors and other articles acknowledging Pharmakon support. There is still a long way to go before Alice hits the bottom of this particular rabbit hole, and it is unlikely to end up anywhere like Wonderland.

Appendix

Md. Sahab Uddin Publications per Dimensions (by citations)

Md. Sahab Uddin’s Publications Citations per Dimensions*

Publication Year

2017

2016

2018

2019

2020

2021

2022

GRAND TOTAL

Unique DOIs

17

12

9

21

35

34

6

134

Sum of Times Cited

181

101

176

837

571

132

1

1999

* This is the number of publications Ripeta identified with just the author’s name and the number of citations to papers during that year.

Simon Linacre

About the Author

Simon Linacre, Head of Content, Brand & Press | Digital Science

Simon has worked in scholarly publishing for almost 20 years. His background is in journalism, and he has been published in academic journals on the topics of bibliometrics, publication ethics and research impact.

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The Secret (Research) Life of the London Underground https://www.digital-science.com/blog/2022/05/secret-research-life-of-london-underground/ Tue, 24 May 2022 06:49:14 +0000 https://www.digital-science.com/?p=57950 With the new Elizabeth line now open, we’ve delved into the Underground’s rich research history.

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Liverpool Street Station, London Underground.
Part of the new Elizabeth line at Liverpool Street Station, London Underground. Photo courtesy of Ian Mansfield (ianVisits).

London’s Underground system was built on the back of the first industrial revolution – a key piece of physical infrastructure that led to a whole new way of thinking about transportation and which fundamentally changed the city in which it was built. It is easy to see parallels between the physical infrastructure building of the 19th century and the cyber infrastructures that we are building today, as the exponential industrial revolution, powered by computers, the internet and AI in which we currently sit develops. Much has been written about cyber infrastructures – there are over 5.7 million publications classified as “Information and Computing Sciences” (of which 3.1 million relate to AI and Image Processing) in Dimensions at the time of writing. While good infrastructure is often invisible, in the sense that it merges seamlessly into and becomes part of our lives, it is, perhaps, surprising to know that the London Underground also lays claims to a significant body of research.

Today marks the launch of London’s newest and shiniest piece of transport infrastructure – the Elizabeth line, which connects the far west of London, including Heathrow Airport (and ultimately out beyond Reading), to its eastern environs in Stratford and Abbey Wood. For those of us who are frequent travellers (or, more accurately, who used to be frequent travellers before COVID and issues of sustainability reigned us in) it is heartening, finally, to see a high-speed transport link that runs across London. In honour of the Elizabeth Line’s launch, we thought that we would do a little digging into the London Underground on the Dimensions platform where we uncovered a huge range of impacts across a wide range of topics.

Beyond the 42km of new tunnels and the new stations with their clean lines, this new line shows that London as a city continues to expand, extend and change in a variety of different ways. The London Underground, or Tube, is an iconic part of London and holds a special place in the hearts of many Londoners. There is a sense of pride in the design principles behind its maps and iconography, and the fact that it is the oldest such mass transit system in the world, which first opened in 1863. That pride will only increase now that we can understand a little more about its rich research history.

In recent years, the London Underground has moved beyond merely being a transport system and is now the subject of many books, from Stephen Smith’s excellent Underground London: Travels Beneath the City Streets to Andrew Martin’s intriguing Seats of London: A Field Guide to London Transport Moquette Patterns. It is not, however, only authors of books who have taken an interest in the Tube – there is a surprising amount of research material that makes reference to the London Underground and, in commemoration of today’s launch, we thought that we would give some insight into the way in which the most recognisable transport system in the world has been referred to in the research literature.

We specified a general search term as a high-level ‘catch all’ in Dimensions:

"London Underground" OR "London Tube" OR "Crossrail" OR "Elizabeth Line" OR "Piccadilly Line" OR "Circle Line" OR "District Line" OR "Metropolitan Line" OR "East London London" OR "Circle and District Line" OR "Victoria Line" OR "Jubilee Line" OR ("Central Line" AND "London Underground") OR "Northern Line" OR "Bakerloo Line" OR "Waterloo and City Line" OR "Waterloo & City Line" OR "Hammersmith and City Line" OR "Hammersmith & City Line" OR "Harry Beck”.

As of 24th May 2022, this search string returns just over 90,000 publications, 66 datasets, 104 grants, almost 25,000 patents, 4000 policy documents and 3 clinical trials. At first glance, this wealth of output is astounding and unexpected. Indeed, barely a year goes by when between 3000 and 4000 publications (equivalent to the research volume of a fairly sizeable university) don’t mention the London Underground in some form. But, when you think about the ways in which such a historic transport system touches different aspects of our lives you begin to understand why it is mentioned so much.

Figure 1: Topic landscape of London Underground research outputs from Dimensions.

Walking the landscape

We mentioned the importance of the London Underground’s maps and iconography, so it’s only natural we should make our own map of the landscape of London Underground research. Figure 1 is a high-level topic map of some of the more recent work that mentions the London Underground using Lingo4G. The closer areas are, the more closely connected they are; words that are shown are derived from article titles; colouring indicates groupings (note that some colours are repeated so that, for example, blue in one area of the graph is not necessarily the same topic group as another area of the graph). Just looking at this high-level representation gives an impression of the immense diversity of topics covered in the literature.

Just to give a flavour, topics range from: Accessibility (of the Tube map) to station accessibility for disabled people; urban design and congestion analysis; use of solar cells and graphene in mass transport systems for sustainability; economics and public policy (private-public sector partnerships); film and fiction (as a venue for movie making or as a setting for narrative); fuzzy logic and control systems (in train service optimisation); history (relationship to the industrial revolution); crisis management and terrorism (relationship to threats in public systems); epidemiology (virus spreading on the Tube and the prevalence of Culex Mosquitos on the Tube network as disease vectors); human interface design (the Tube map); network theory (as a commonly recognisable analog for the mathematical concept of a graph); climate change (how mass transit can be a powerful weapon against climate change); cybersecurity (protection of infrastructures against attack); geology (tunnelling through challenging formations); and crime (policing unusual environments).

This list merely scratches the surface of the rich research topics that surround the London Underground. One hundred and fifty nine years into the existence of this key piece of infrastructure, its cultural, historical and research impact is not at first evident.

Part of the new Elizabeth line at Paddington Station, London Underground.
Part of the new Elizabeth line at Paddington Station, London Underground. Photo courtesy of Ian Mansfield (ianVisits).

Distinctive personalities

Of course, while the London Underground was the first major subterranean railway, it is not the only one.  Many, including Shanghai, Tokyo, Paris, Singapore and Berlin are busier. Despite the unique and beautiful tiling designs across the London Underground, Moscow’s Soviet-inspired mosaics and Paris’s Art deco might be considered to be more aesthetic. London is only 10th in the world in length of track and 9th in number of stations.  However, arguably it has had the most research articles written about it, with the New York Metro coming in a close second at 86,000 outputs, and other notable mentions being the Paris Metro with more than 14,000 outputs and the Tokyo Metro with almost 13,000 outputs.

Each of these systems has its own personality and, again, looking into Dimensions and, comparing the different queries on a subject level by ANZSRC FOR code at the 2-digit level, we can see a little of those personalities emerging in Figure 2.

While the London Underground is most studied from the perspective of Engineering and Sociology (Studies in Human Society), both it and the Paris Metro are not nearly so studied (relative to overall output) as the New York Subway and Tokyo Metro for Medical and Health Sciences. Engineering is not such a strong theme for New York and Paris (presumably because much of the network is much nearer the surface and less tunnelled than either London or Tokyo). London and Paris share a peak in History and Archeology for understandable reasons.

It is, perhaps, also interesting to note the “inner life” of these underground reflections of the cities above.  Again, relative to the overall output of research New York has a significant peak where researchers have written about Psychological and Cognitive Science topics whereas the London Underground has been more discussed in the Education literature. The Paris Metro has had more attention in works on Economics and in Creative Arts and Writing.

Figure 2: Comparison of publication research output for all years by ANZSRC 2-digit FOR classification for four major subterranean railways by percentage of total output. Note that bars for each railway will not add to 100% as outputs can contribute to multiple classifications and full output counting rather than fractional counting has been used here.

International Attention

The final musing that we want to leave you with is that despite the local nature of transport systems, they attract international research attention. Indeed, 87.7% of the research outputs relating to the London Underground do not feature a UK-based author (although of that 12.3% focus from the UK a very considerable number of papers (more than 3000) can be attributed to London-based institutions).  It is a similar story with other international transit systems – Paris enjoys a similar percentage of international attention to London with New York and Tokyo both being a little more locally biased with 77.3% and 80.9% of their research coming from non-local sources.

While research on underground railways in general has been the focus of this piece, a cursory look at both scientometric and bibliometric research literature suggests that understanding the scholarly record around London Underground has not been a priority for the community. But, with the launch of the Elizabeth line today, we are confident that this is about to change!  We hope that this brief analysis demonstrates that there is so much more to the Tube than getting from A to B and inspires you to search Dimensions for your favourite topics.

The Authors

Daniel Hook, CEO | Digital Science

Simon Porter, Director Innovation | Digital Science

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Advancing Innovation https://www.digital-science.com/challenge/knowledge-creation/ Mon, 21 Dec 2020 10:20:41 +0000 https://www.digital-science.com/?post_type=project&p=42308 Digital Science supports a world in which scholarly communication has successfully moved to a new model that is able to fully encapsulate the emergent nature of research, and allow that to be leveraged in the most impactful way possible.

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Advancing Innovations in Scholarly Communication

Scholarly communication is central to today’s research process. It is the creation, evaluation and dissemination of knowledge acquired through the act of research. This further includes the way in which research is reported on, and how that knowledge is translated from the lab to the wider research community.

At Digital Science, we believe that effective scholarly communication adds value to research. This transfer of knowledge has taken a specific form for many centuries, however, an ever-changing and evolving research ecosystem requires a fresh approach to best support the communication of research findings in a way that most appropriately aligns with today’s research.

We want to support a world in which scholarly communication has successfully moved to a new model that is able to fully encapsulate the emergent nature of research, and allow that to be leveraged in the most impactful way possible. We want our software solutions to move the research community towards a more contextualised writing and communication experience.

Supporting Meaningful Communication

Changing scholarly communication infrastructures

Planned serendipity

Most discoveries were stumbled on “serendipitously” and serendipity fuels innovation. Our tools, such as ReadcubeAltmetric and Dimensions help to create a foundation that advances the research to a new era beyond our imagination.

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Advancing Research Collaboration https://www.digital-science.com/challenge/advancing-research-collaboration/ Wed, 16 Dec 2020 12:25:39 +0000 https://www.digital-science.com/?post_type=project&p=40529 Research is by its very nature a collaborative effort. We share datasets, pictures, words, and sounds.

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Advancing Research Collaboration

Collaboration has been at the heart of how Digital Science has grown. Research is by its very nature a collaborative effort. It requires us to share our ideas with others to gain a better understanding of the world around us. We share datasets, pictures, words, and sounds. Our tools for collaboration evolve with our research, to enable more seamless collaboration.

Use our solutions to help you visualize existing research networks; rapidly find individuals, and reveal potential conflicts of interest. Finding the appropriate external relationships increases your chances for funding and boosts your institution’s reputation.

Overleaf collaboration report

Building Institutional Collaboration Diagrams

Institutional collaboration diagrams can quickly facilitate discussions on an institution’s collaborative practices and are a common request of research analysts. Without access to an API to retrieve the required information, the process of building collaboration diagrams can often be tiresome and repetitive.

Find out more >

Use our solutions to improve your collaboration strategy

Increased international collaboration produces higher-quality research

Increased international collaboration produces higher-quality research

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Blockchain for Research https://www.digital-science.com/resource/blockchain-for-research/ Sun, 12 Nov 2017 23:06:02 +0000 https://www.digital-science.com/?post_type=story&p=41863 This report will zoom in on the potential of blockchain to transform scholarly communication and research in general.

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Blockchain for Research

Blockchain Report Cover

Blockchain is a revolutionary technology that has the potential to fundamentally change many industries, which include banking, music and the publishing industry. This report will zoom in on the potential of blockchain to transform scholarly communication and research in general. By describing important initiatives in this field, it will highlight how blockchain can touch many critical aspects of scholarly communication, including transparency, trust, reproducibility and credit.

Moreover, blockchain could change the role of publishers in the future, and it could have an important role in research beyond scholarly communication. The report shows that blockchain technology has the potential to solve some of the most prominent issues currently facing scholarly communication, such as those around costs, openness, and universal accessibility to scientific information.

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Peer Review in 2030 https://www.digital-science.com/resource/peer-review-in-2030/ Wed, 17 May 2017 10:43:29 +0000 https://www.digital-science.com/?post_type=story&p=41930 This report examines how peer review can be improved for future generations of academics and offers key recommendations to the academic community.

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Blockchain for Research

What will peer review look like cover

Peer review presents one of the greatest opportunities, and challenges, in advancing discovery. Various methods of peer review have been in existence for the last 350 years, but only formally used by journals since the 1960s. Despite all its perceived flaws — that it can be slow, inefficient, biased and open to abuse — peer review retains its pivotal role in validating research results, typically prior to, but also post, publication.

What might peer review look like in 2030’ examines how peer review can be improved for future generations of academics and offers key recommendations to the academic community. The report is based on the lively and progressive sessions at the SpotOn London conference held at Wellcome Collection Conference centre in November 2016

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Curating the Scholarly Record https://www.digital-science.com/blog/2017/01/curating-scholarly-record-daniel-hook-carnegie-mellon-university/ Fri, 13 Jan 2017 12:22:02 +0000 https://www.digital-science.com/?p=23123 As part of the international celebrations to mark Open Access Week (24-30th October 2016) Carnegie Mellon University (CMU) hosted a number of events to encourage debate and discussion about the future of open access. CMU has set out strategic plans for its libraries, with commitments to curating its data, publications, software, and other products of the research […]

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As part of the international celebrations to mark Open Access Week (24-30th October 2016) Carnegie Mellon University (CMU) hosted a number of events to encourage debate and discussion about the future of open access.

CMU has set out strategic plans for its libraries, with commitments to curating its data, publications, software, and other products of the research process. By developing an infrastructure built around information specialists as partners in research, teaching, and learning, CMU aims to become a leader in the best practice of scholarly communication.

dwh

Our Managing Director, Daniel Hook, was invited to take part in the session titled:

‘Curating the Scholarly Record: The Development of the Scholarly Information Ecosystem at Carnegie Mellon University’

Follow Daniel@danielintheory 

 

 

 

Topics covered:

  • How to describe, store, and share your data
  • Make your scholarly outputs more openly accessible
  • Understand how funding agencies support research in your field
  • Understand how your work is reported in newspapers, social media, and online academic services

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