gigantum Archives - Digital Science https://www.digital-science.com/tags/gigantum/ Advancing the Research Ecosystem Tue, 01 Aug 2023 09:27:40 +0000 en-US hourly 1 https://wordpress.org/?v=6.7.2 What does New Zealand Research Look Like? https://www.digital-science.com/resource/what-does-new-zealand-research-look-like/ Tue, 22 Dec 2020 16:55:44 +0000 https://www.digital-science.com/?post_type=story&p=42768 This poster demonstrates collaboration patterns for Australasian Research Organisations.

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What does New Zealand Research Look Like?

External (left) and internal (right) collaboration patterns are presented here for Australasian Research Organisations (selected by top 20 ). Researchers are coloured by the field of research that they most commonly publish in, and sized by total number of journal articles that they have published (relative to the network). To create the networks, journal articles published between 2015 and 2018 were analysed.

If you want to find out more check out our interactive dashboard.

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Reproducibility By Design https://www.digital-science.com/challenge/reproducibility-by-design/ Mon, 21 Dec 2020 11:35:09 +0000 https://www.digital-science.com/?post_type=project&p=42386 Reproducibility should be a natural and integral part of the research process - embedded and invisible wherever possible.

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Reproducibility by Design

Reproducibility should be a natural and integral part of the research process – embedded and invisible wherever possible. However, in recent years, the research world has encountered a reproducibility crisis whereby methods, analytical software, and data reported have not been shared fully openly or accurately.

We are committed to supporting researchers on their path to a more open and reproducible research through the development and implementation of technological solutions.

A Transparency SnapShot

Author awareness and compliance needed

To understand the adoption and impact of transparency guidelines the Ripeta team analysed the top 25 highest impact journals’ manuscripts from 2019. Their results indicate that even the most compliant journals failed to ensure that half of the authors included data availability statements. These results signal the need for better author awareness and improved methods for checking compliance.

Watch the video

Helping to solve the Reproducibility Crisis

Resources

The Anatomy of a Data Availability Statement (DAS)

Reproducibility, Replicability and Trust in Science

Trusting Science in the Time of Coronavirus

Reproducibility or Producibility? Metrics and their Masters

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This Poster is Reproducible https://www.digital-science.com/blog/2019/10/this-poster-is-reproducible/ Fri, 04 Oct 2019 11:00:15 +0000 https://www.digital-science.com/?p=32194 Ou project demonstrates an approach to undertaking reproducible computational science that operates on multiple levels.

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Exploring a Digital Science Workflow for Reproducible Science

Expectations around reproducible research are clear, particularly in the area of computational research. A research paper is more than an account of the research that was undertaken; it is a narrative that surrounds an orchestration of research assets from the raw data and code to the processed data and visualisations that result. A paper should invite a reader to trace the results back. How was this figure produced? What was the code that produced that particular result? The reader’s transition from narrative to exploring data or code should be as easy as turning the page.

Seen from the researcher’s perspective, the ideal computational paper arises organically from the research – the data that is created is the data that ends up in the paper. The code as it is written is the code that can be accessed in the paper. As analysis bubbles up from research into images for publication, those images keep their providence back to the data, and back to the code that produced them.

How close are we to this ideal today? Within the Digital Science family, methods for openly publishing data are ably supported by Figshare. Overleaf allows researchers to easily publish their research collaboratively using LaTeX.  As part of a poster presentation for the 2019 VIVO conference we took a broad research question that could be answered with Dimensions data, and undertook the research using workflows that knit these tools together. In doing so, our project, documented in our white paper, demonstrates an approach to undertaking reproducible computational science that operates on multiple levels. Specifically, it addresses:

  • How can data assets be structured and organised throughout the life of a project inside Figshare (and not just at the end of a project)?
  • What is a good approach to tying code, data, and papers together using identifiers?

In this paper we demonstrate that not only is our poster reproducible, but that the methods we have adopted are useful to others as well. We feel we learnt a lot throughout this project, and hope to continue to refine these approaches in our analysis projects moving forward.  From analysis through to publication, we would love to hear about some of the ways that you have used research productivity tools in similar ways. Get in touch!

PS – This is the first Digital Science Report to be made entirely in Overleaf

Technical Report: https://doi.org/10.6084/m9.figshare.9741890

Poster: https://doi.org/10.6084/m9.figshare.9742055

Online Version: https://wdaull.ds-innovation-experiments.com/

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Peer Review Week Presentation on the Physiome Journal project https://www.digital-science.com/resource/peer-reveiw-week-the-physiome-journal-project/ Thu, 19 Sep 2019 16:46:14 +0000 https://www.digital-science.com/?post_type=story&p=42764 This presentation documents the work done to support the Peer Review Process for the Physiome Journal.

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What does New Zealand Research Look Like?

This work documents the work done to support the Peer Review Process for the Physiome Journa

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This Poster is Reproducible https://www.digital-science.com/resource/this-poster-is-reproducible/ Thu, 22 Aug 2019 17:01:21 +0000 https://www.digital-science.com/?post_type=story&p=42776 This paper describes the process of making the 'What Does a University Look Like?' poster for the 2019 VIVO conference.

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What does New Zealand Research Look Like?

The research world has moved faster than many would have suspected possible in response to the current pandemic. In five months, a volume of work has been generated that even the most intensive of emergent fields have taken years to create.

We investigate the research landscape trends and cultural changes in response to COVID-19. The report includes analysis of publication trends, geographic focal points of research, and collaboration patterns.

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Gigantum and ripeta Join the Digital Science Family https://www.digital-science.com/blog/2019/04/gigantum-and-ripeta-join-the-digital-science-family/ Mon, 08 Apr 2019 15:35:39 +0000 https://www.digital-science.com/?p=31419 Two startups join the Digital Science family: automated reproducibility assessment tool, Ripeta, and data science platform, Gigantum.

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We are proud to welcome a US-based startup to the Digital Science family of companies: automated reproducibility assessment tool, ripeta.

Daniel Hook, CEO of Digital Science, said:

“Reproducibility of research is one of the critical topics of modern times – if research is to remain trusted by the populations who fund it, then researchers must ensure that their research can be reproduced by others.”

The company is playing a key role in making scientific research reproducible and more transparent. Ripeta is developing a “credit report” for scientific publications to assess and help improve the transparency needed to effectively communicate research.

Leslie McIntosh, CEO of ripeta, said:

“While technological innovations have accelerated scientific discoveries, they have complicated scientific reporting. Science is hard and reproducibility is important, so we need to make better science easier. We are developing the tools to make research methods transparent, enabling the verifiability, falsifiability and reproducibility of research. We are thrilled to receive this investment with the great team at Digital Science who provide a fantastic partnership. This will propel our work at ripeta helping make scientific reporting more transparent.”

Read the full press release here.

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