OntoChem Archives - Digital Science https://www.digital-science.com/tags/ontochem/ Advancing the Research Ecosystem Wed, 27 Mar 2024 14:42:36 +0000 en-US hourly 1 https://wordpress.org/?v=6.7.2 AI at Digital Science https://www.digital-science.com/resource/ai-digital-science/ Fri, 18 Aug 2023 14:42:22 +0000 https://www.digital-science.com/?post_type=story&p=65335 How does Digital Science and it's portfolio of companies use AI?

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How does Digital Science use AI? We ask ChatGPT

The year 2023 will forever be remembered as the year that AI finally broke into the mainstream. But in the research ecosystem, what do we mean by AI and how is it already being used? Simon Linacre does what everyone has been doing and asks AI itself for some answers

Anyone would be forgiven for thinking that artificial intelligence (AI) had only just been invented given the huge interest that has suddenly been generated in it in 2023. However, AI actually has a long history, being first conceived of in the 1950s and gradually becoming a reality in the decades after. Nevertheless, a real step forward has been made with Generative AI, which can create seemingly flawless text or images in just seconds. But is it really that new?

Writing these words on a Google Doc, I have already accepted one or two suggestions from the predictive text function, itself a form of AI. When you realize that the words you have chosen have not 100% been your own, you can see how lines have started to blur with the more advanced Generative AI’s capabilities. However, caution must still be used as AI is more than capable of getting things wrong – just read Digital Science’s post on ‘The Lone Banana Problem’. Moreover, a lack of context or key detail can lead to misrepresentation or redundancy in the content being created.

Digital Science and AI

Digital Science has been using AI and related technologies such as Machine Learning (ML) and Natural Language Processing (NLP) for several years now – indeed, Dimensions has had https://www.dimensions.ai as its URL since its launch in 2018 – and it has become a trusted partner for hundreds of organizations that depend on its AI expertise. These are the ways Digital Science and its portfolio companies uses AI-related technologies in 2023:

Dimensions

  • Document classification; Researcher Disambiguation; Research Integrity Trust Markers

OntoChem

  • Image classification to decide whether an image shows a chemical compound; Entity recognition to decide whether a term describes a chemical compound

ReadCube

ReadCube graphic
  • Sentiment Analysis for Mentions; Article Recommendation Engine

metaphacts

  • Knowledge Graph and graph-based reasoning

Writefull

Writefull graphic
  • Core writing assistance offering is AI-based; AI detection

Ask ChatGPT

The information above is correct because, well, I work at Digital Science and I know it to be true. It also breaks the information down by constituent parts in terms of each Digital Science company and how it uses the relevant technology. So what happens if we ask a Generative AI model how Digital Science uses AI? Well, we get the text below courtesy of OpenAI’s new ChatGPT iPhone app:

“Digital Science, as a company that provides scientific software and research solutions, utilizes AI in various ways. Here are a few examples:

  • – Text and data mining: AI algorithms are employed to analyze large volumes of scientific literature, extracting valuable insights, identifying trends, and accelerating the discovery process.
  • – Natural Language Processing (NLP): Digital Science uses NLP techniques to enhance the understanding and processing of scientific texts, enabling advanced search capabilities, automatic categorization, and semantic analysis.
  • – Predictive analytics: AI models are trained on scientific data to predict outcomes, such as the success or impact of research projects, funding opportunities, or potential collaborations, helping researchers make informed decisions.
  • – Recommendation systems: By employing machine learning algorithms, Digital Science can provide personalized recommendations to researchers, suggesting relevant articles, journals, or research resources based on their interests and previous activities.
  • – Data visualization and exploration: AI-powered tools enable the creation of interactive visualizations and data exploration platforms, allowing scientists to gain deeper insights from complex datasets and facilitate data-driven decision-making.

These are just a few examples of how Digital Science incorporates AI into its offerings. The field of AI is rapidly evolving, and new applications are continually emerging to support scientific research and discovery.”
Source: ChatGPT

While all of the information presented by the AI is correct, it is broken down by technical functionality, only presenting ‘examples’ of how technology is used and not what it is used on. As such, it is technically very accomplished, but of little interest to most audiences who would miss the context of how the technology is actually being applied.

AI vs Humans

In 2023 while all the hoo-haa around Generative AI was at its peak, Digital Science launched a campaign called ‘Mind the Trust Gap’ which sought to underline the importance of trust in research among those who both carry out research itself and the rest of us who depend on its integrity and quality. The developments in AI technology are often compared to humans like it is some sort of competition or even battle, but it is perhaps more sensible to view it as a relationship entering a new phase, and trust is key to that relationship. As long as we can use AI with transparency and openness like the examples above, we can build a better understanding of the world around us.

Can our AI-powered solutions help you?

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Ontochem https://www.digital-science.com/product/ontochem/ Wed, 14 Jun 2023 14:58:58 +0000 https://www.digital-science.com/?post_type=product&p=62426 OntoChem’s text mining, natural language processing and semantic data extraction technologies make the most of all internal and external data sources available in organizations.

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AI at Digital Science
Find. Extract. Predict.

What we do at OntoChem

OntoChem’s text mining, natural language processing and semantic data extraction technologies make the most of all internal and external data sources available in organizations. Our products help them to extract information from unstructured and structured data and to turn it into knowledge for research and discovery, as well as for decision-making. 

Our innovative technologies offer large-scale and future-proof solutions that maximize the organization and discovery of data. In addition, our information discovery tools help companies to find information by automatically indexing and analyzing internal as well as external data collections.  

We are on a mission:  to make not only your content, but all the world’s scientific and  IP-relevant content semantically discoverable and therefore ever more valuable.

Our Products

SciWalker

A semantic search tool that supports life and material science communities – covering life science concepts from more than 20 knowledge domains. It enables in-house chemical structure and substructure meta search over full text documents using sophisticated concept-based queries from more than one billion knowledge facts extracted from internal and external text sources like PMC/Medicine, clinical trials and databases like ChEMBL. 

SciWalker also includes the Ontologies meta search engine and OC Processor annotation pipeline, which are also available separately (see below).

OntoChem Ontologies

This provides a range of ontologies for specific medical and biochemical applications – such as Anatomy, Antibodies, Cell lines or Chemistry – which can all be added to the SciWalker platform, or provided on their own.  It can manage complex facts from any knowledge domain with extreme efficiency, yet is easy to use as it does not require any pre-defined data schema and can be integrated with any in-house search capabilities.

OntoChem Processor

A highly customizable, easy-to-use, standalone document normalization and annotation pipeline. The OntoChem Processor allows you to enter text from any source, and the processor tool will quickly annotate the text with identified terms and categories related to OntoChem’s stock ontologies and term libraries, instantly surfacing terms and concepts connected to any one of OntoChem’s multiple ontologies. As a result, users can easily identify semantic concepts in both internal and external texts – from company names to diseases to proteins and chemical compounds.

OntoChem in Practice

Pharma Industry Products

OntoChem products have a number of uses in the pharmaceutical industry. For example, a careful semantic analysis of disease-related protein targets and their binding see spatial or functional similarity with other proteins. Consequently, we suggest innovative starting points for further medicinal and chemical optimization work, an example of which is the starting point that led to the development of Almorexant. 

Cosmetic Industry Products

Other uses of OntoChem product in the cosmetic industry include semantic, structural analysis of natural products from edible plants. The biological properties of such plants that have been published are used to design synergistic combinations of natural, innovative cosmetic products. Because the process and results differ from classic cosmetic product development, there is a clear and demonstrable benefit of the use of our products.

More about Digital Science

We’re an innovative technology company. Our vision is of a future where a trusted and collaborative research ecosystem drives progress for all.  Contact us to find out how our products & services can help fuel opportunity, innovation and discovery

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